42 clinical MCQs in Molecular Genetics and Cytogenetics. What is the minimum population frequency required for a genetic variant to be classified a. Ken...
Q1. What is the minimum population frequency required for a genetic variant to be classified as a polymorphism?
Answer: 10%
Explanation: A polymorphism is defined as a genetic variant that has at least two alleles and occurs in at least 1% of the population. ---
Q2. In complex multigenic disorders, what percentage of type 1 diabetes risk is contributed by a few HLA alleles?
Answer: More than 50%
Explanation: Of the 20 to 30 genes implicated in type 1 diabetes, a few HLA alleles contribute more than 50% of the risk, demonstrating that different polymorphisms vary significantly in their contribution. ---
Q3. Which environmental factor is most commonly associated with unmasking the genetic trait in type 2 diabetes mellitus?
Answer: Obesity
Explanation: Type 2 diabetes often first manifests clinically after weight gain, demonstrating how obesity as an environmental factor unmasks the diabetic genetic trait. ---
Q4. What proportion of newborn infants has some form of chromosomal abnormality?
Answer: 1 in 200
Explanation: It is estimated that approximately 1 in 200 newborn infants has some form of chromosomal abnormality. ---
Q5. What percentage of first-trimester spontaneous abortions are associated with chromosomal abnormalities?
Answer: 50%
Explanation: Approximately 50% of first-trimester spontaneous abortions are associated with chromosomal abnormalities. ---
Q6. A chromosome number of 3n is classified as
Answer: Polyploid
Explanation: Any exact multiple of the haploid number (n) is called euploid, and numbers such as 3n and 4n are specifically called polyploid. ---
Q7. What is the primary cause of aneuploidy?
Answer: Nondisjunction during meiosis
Explanation: The chief cause of aneuploidy is nondisjunction of a homologous pair of chromosomes at the first meiotic division or failure of sister chromatids to separate during the second meiotic division. ---
Q8. What is the chromosome count in a trisomic zygote?
Answer: Mostly unchanged in early disease
Explanation: When a gamete with an extra chromosome (n + 1) is fertilized by a normal gamete (n), the resulting zygote is trisomic with chromosome count of 2n + 1. ---
Q9. Which type of chromosomal abnormality is better tolerated: autosomal or sex chromosomal?
Answer: Sex chromosome imbalances
Explanation: Imbalances of sex chromosomes (excess or loss) are tolerated much better than similar imbalances of autosomes, often producing subtle abnormalities. --- ## SECTION B: CHROMOSOMAL TERMINOLOGY & NOTATION (Questions 11-16) ---
Q10. What does mosaicism refer to in cytogenetics?
Answer: Mosaicism
Explanation: Mosaicism is the presence of two or more populations of cells with different complements of chromosomes in the same individual, commonly affecting sex chromosomes. ---
Q11. In cytogenetic notation, what does "p" represent?
Answer: Short arm (petit)
Explanation: In cytogenetic shorthand, "p" (French, petit) denotes the short arm of a chromosome, while "q" denotes the long arm. ---
Q12. What does the notation 46,XX,t(2;5)(q31;p14) indicate?
Answer: Reciprocal translocation between chromosomes 2 and 5
Explanation: This notation indicates a reciprocal translocation involving the long arm of chromosome 2 at region 3, band 1, and the short arm of chromosome 5, region 1, band 4. ---
Q13. What is a Robertsonian translocation?
Answer: Translocation between two acrocentric chromosomes
Explanation: Robertsonian (centric fusion) translocation is a reciprocal translocation between two acrocentric chromosomes involving the short arm of one and long arm of the other. ---
Q14. What is the most common isochromosome found in live births?
Answer: i(Xq)
Explanation: The most common isochromosome present in live births involves the long arm of the X chromosome and is designated i(Xq), resulting in monosomy for Xp genes and trisomy for Xq genes. ---
Q15. How does an isochromosome form?
Answer: Horizontal division of centromere
Explanation: Isochromosomes result when the centromere divides horizontally rather than vertically, leading to loss of one arm and duplication of the remaining arm. --- ## SECTION C: DOWN SYNDROME (TRISOMY 21) (Questions 17-27) ---
Q16. What percentage of Down syndrome cases are caused by trisomy 21?
Answer: 95%
Explanation: About 95% of affected persons with Down syndrome have trisomy 21, with a chromosome count of 47, most commonly caused by meiotic nondisjunction. ---
Q17. What is the maternal age-related incidence of Down syndrome in women older than 45 years?
Answer: 1 in 25
Explanation: Down syndrome occurs in 1 in 1550 live births in women younger than 20 years but increases dramatically to 1 in 25 live births in women older than 45 years. ---
Q18. In what percentage of Down syndrome cases is the extra chromosome of maternal origin?
Answer: 95%
Explanation: In 95% of Down syndrome cases, the extra chromosome is of maternal origin, supporting that meiotic nondisjunction occurs primarily in the ovum. ---
Q19. What percentage of Down syndrome cases result from translocation?
Answer: 15%
Explanation: In about 4% of all patients with trisomy 21, the extra chromosomal material is present as a translocation of the long arm of chromosome 21 to chromosome 22 or 14. ---
Q20. What percentage of Down syndrome patients are mosaics?
Answer: 10%
Explanation: Approximately 1% of patients with trisomy 21 are mosaics, usually having a mixture of 46- and 47-chromosome cells resulting from mitotic nondisjunction during embryogenesis. ---
Q21. What percentage of Down syndrome patients have congenital heart disease?
Answer: 40%
Explanation: Approximately 40% of Down syndrome patients have congenital heart disease, most commonly endocardial cushion defects including atrial septal defects and ventricular septal defects. ---
Q22. What is the increased risk of acute leukemia in children with Down syndrome?
Answer: 10- to 20-fold
Explanation: Children with trisomy 21 have a 10- to 20-fold increased risk of developing acute leukemia, including both acute lymphoblastic leukemias and acute myeloid leukemias. ---
Q23. What is the current median age at death for persons with Down syndrome?
Answer: 25 years
Explanation: Improved medical care has increased the longevity of persons with trisomy 21, with the current median age at death being 47 years, up from 25 years in 1983. ---
Q24. Which immune cell function is primarily affected in Down syndrome patients?
Answer: T cell functions
Explanation: Patients with Down syndrome demonstrate abnormal immune responses affecting mainly T cell functions, predisposing them to serious infections and thyroid autoimmunity. ---
Q25. What is the typical IQ range for approximately 80% of individuals with Down syndrome?
Answer: 25 to 50
Explanation: Down syndrome is a leading cause of severe mental retardation, with approximately 80% of those afflicted having an IQ of 25 to 50. --- ## SECTION D: OTHER AUTOSOMAL DISORDERS (Questions 28-30) ---
Q26. What is the chromosomal abnormality in Patau syndrome?
Answer: Trisomy 13
Explanation: Patau syndrome is caused by trisomy 13, occurs less commonly than trisomy 21, and is associated with increased maternal age and severe malformations. ---
Q27. Which chromosome is involved in 22q11.2 deletion syndrome?
Answer: Chromosome 22
Explanation: The 22q11.2 deletion syndrome results from a small interstitial deletion of band 11 on the long arm of chromosome 22. ---
Q28. Which two previously separate syndromes are now known to be caused by 22q11.2 deletion?
Answer: DiGeorge and velocardiofacial syndromes
Explanation: DiGeorge syndrome and velocardiofacial syndrome were previously believed to be different disorders but are now known to both be caused by 22q11.2 deletion. ---
Q29. Which transcription factor gene is suspected to be responsible for 22q11.2 deletion syndrome?
Answer: TBX1
Explanation: The transcription factor gene TBX1 is suspected to be responsible for 22q11.2 deletion syndrome, as its loss seems to correlate with the occurrence of DiGeorge syndrome. ---
Q30. What diagnostic technique is used to establish the diagnosis of 22q11.2 deletion syndrome?
Answer: Fluorescence in situ hybridization (FISH)
Explanation: The diagnosis of 22q11.2 deletion syndrome can be established only by detection of the deletion using fluorescence in situ hybridization (FISH). ---
Q31. What metabolic abnormality is commonly seen in DiGeorge syndrome due to parathyroid hypoplasia?
Answer: Hypocalcemia
Explanation: Parathyroid hypoplasia in DiGeorge syndrome results in hypocalcemia, which is one of the characteristic features of the condition. --- ## SECTION F: COMPLEX INHERITANCE & GENETIC CONCEPTS (Questions 37-44) ---
Q32. According to the common disease-common variant hypothesis, complex multigenic disorders occur when
Answer: Many polymorphisms with modest effects are co-inherited
Explanation: Complex multigenic disorders occur when many polymorphisms, each with a modest effect and low penetrance, are co-inherited according to this hypothesis. ---
Q33. How many genes are most important among the 20 to 30 genes implicated in type 1 diabetes?
Answer: 6 to 7
Explanation: Of the 20 to 30 genes implicated in type 1 diabetes, 6 or 7 are considered most important, demonstrating that polymorphisms vary in significance. ---
Q34. In general, which produces more severe defects?
Answer: Loss of chromosomal material
Explanation: In general, loss of chromosomal material (deletion, monosomy) produces more severe defects than does gain of chromosomal material (trisomy). ---
Q35. What is the outcome of polyploidy in most cases?
Answer: Spontaneous abortion
Explanation: Polyploidy, which refers to exact multiples of the haploid number such as 3n and 4n, generally results in spontaneous abortion. ---
Q36. What is the result of anaphase lag during cell division?
Answer: Aneuploidy
Explanation: Failure of pairing of homologous chromosomes followed by random assortment (anaphase lag) can lead to aneuploidy. ---
Q37. What type of chromosome rearrangement results in formation of one abnormally large chromosome and one extremely small one in Robertsonian translocation?
Answer: Transfer of segments between acrocentric chromosomes
Explanation: In Robertsonian translocation, the transfer of segments between acrocentric chromosomes leads to formation of one abnormally large chromosome and one extremely small one that is usually lost. ---
Q38. What happens to the isolated fragment lacking a centromere after deletion?
Answer: It almost never survives
Explanation: After deletion with two interstitial breaks, the isolated fragment which lacks a centromere almost never survives, and thus many genes are lost. ---
Q39. What type of structural abnormality is a ring chromosome considered to be?
Answer: Variant of deletion
Explanation: A ring chromosome is considered a variant of deletion where, after loss of segments from each end of the chromosome, the arms unite to form a ring. ---
Q40. In most chromosomal disorders, what is the typical pattern of inheritance?
Answer: De novo changes
Explanation: In most cases, chromosomal disorders result from de novo changes (parents are normal, and risk of recurrence in siblings is low). ---
Q41. Which form of Down syndrome is an important exception to the low recurrence risk principle?
Answer: Translocation form of Down syndrome
Explanation: An uncommon but important exception to the low recurrence risk is exhibited by the translocation form of Down syndrome, which can be inherited from a parent who is a carrier. ---
Q42. What psychiatric conditions are patients with 22q11.2 deletion at particularly high risk for?
Answer: Schizophrenia and bipolar disorder
Explanation: In addition to malformations, patients with 22q11.2 deletion are at particularly high risk for psychoses such as schizophrenia and bipolar disorder. --- ## ANSWER KEY Section A (1-10): B, C, B, C, C, B, B, C, C, C Section B (11-16): B, C, B, B, B, B Section C (17-27): C, C, D, B, A, C, C, B, C, B, B Section D (28-30): B, A, B Section E (31-36): C, B, B, C, B, C Section F (37-44): B, B, B, A, C, B, B, B Section G (45-50): C, C, B, D, C, B --- ## SCORING GUIDE - 45-50 correct: Excellent - Well prepared for exam - 40-44 correct: Very Good - Minor review needed - 35-39 correct: Good - Review weak areas - 30-34 correct: Fair - Significant review n